miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|110383895|gb|EC948300.1|EC948300 TTTGTTTCTGCAATTTTACTCCATAAATCCCAATGTCATCAGCTAAATGACAATGTGATACATCGAATTAATACCAATAA
TGCTTGAATTAGATTCATGGATATTAAGAGAAAGGAATGCTGCTCCCTAAGCAGCAACTGAAAATGATTAATCATACTGG
AAATGCATATACATGAAAGCATTGTAGCAGAAGATAGAAAAGAAGATAGATGATGATCAGCTGATCTTAAATTAGAAGGA
GTACTTTTTTTTAAGGACTTCCAAAGTCCCAGCTACAGCACACATAAATCCAATCAAGAATGCATAGCATCATGAGCAAT
CAGCCTTAGATTTTAGCAGAGTGACTGCTCATGATATTATATCATTTCAATTAGCTCCAATGTGCTGCATCCAAAATGGA
ATCGGCTCATCGAAAGCCACCGCCCAGAGCCGGAGCCCAATAATCTGCTCCATTGTCGCTCCCAACTTGCAGTGTGCATG
AAACAGGCACCAGACACAACCCTCTACTTCTCAGGTCTTTCTTTGGTTCTTCATGAGATTCCTGGTCGGAAGCTCCTTTC
CTCTTCATGCCGTTATCATTCAACAGCTGGCCAGGGTCTTCAC




Most similar to sp|Q8S3D1|BH068_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68 OS=Arabidopsis
           thaliana GN=BHLH68 PE=2 SV=2
          Length = 407

 Score =  106 bits (264), Expect = 1e-22
 Identities = 51/65 (78%), Positives = 56/65 (86%), Gaps = 5/65 (7%)
 Frame = -3

Query: 601 EDPGQLLNDNGMKRKGAS-----DQESHEEPKKDLRSRGLCLVPVSCTLQVGSDNGADYW 437
           EDPGQL+ND  MKR+GAS     +Q + EEPKKDLRSRGLCLVP+SCTLQVGSDNGADYW
Sbjct: 338 EDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGADYW 397

Query: 436 APALG 422
           APALG
Sbjct: 398 APALG 402